| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Victor Vitoldovich Poboinev, Vladislav Victorovich Khrustalev, Tatyana Aleksandrovna Khrustaleva, Tihon Evgenyevich Kasko, Vadim Dmitrievich Popko. The PentUnFOLD algorithm as a tool to distinguish the dark and the light sides of the structural instability of proteins. Amino acids. 2022-03-16. PMID:35294674. |
among other tendencies we have found that regions of both alpha helices and beta strands that can turn into the disordered state are relatively enriched in residues of ala, met, asp, and lys, while regions of both alpha helices and beta strands that can turn into random coil are relatively enriched in hydrophilic residues, and cys, pro, and gly. |
2022-03-16 |
2023-08-13 |
Not clear |
| Elena Di Pierro, Francesca Granata, Michele De Canio, Mariateresa Rossi, Andrea Ricci, Matteo Marcacci, Giacomo De Luca, Luisa Sarno, Luca Barbieri, Paolo Ventura, Giovanna Graziade. Recognized and Emerging Features of Erythropoietic and X-Linked Protoporphyria. Diagnostics (Basel, Switzerland). vol 12. issue 1. 2022-01-21. PMID:35054318. |
the erythroid-specific alas2 catalyses the synthesis of delta-aminolevulinic acid (ala), from the union of glycine and succinyl-coenzyme a, in the first step of the pathway in the erythron. |
2022-01-21 |
2023-08-13 |
Not clear |
| Yuko Ohara Nemoto, Yu Shimoyama, Toshio Ono, Mohammad Tanvir Sarwar, Manami Nakasato, Minoru Sasaki, Takayuki K Nemot. Expanded substrate specificity supported by P1' and P2' residues enables bacterial dipeptidyl-peptidase 7 to degrade bioactive peptides. The Journal of biological chemistry. 2022-01-15. PMID:35032549. |
maldi-tof ms analysis demonstrated that dpp7 efficiently degraded incretins and other gastrointestinal peptides, which were successively cleaved at every second residue, including ala, gly, ser, and gln, as well as authentic hydrophobic residues. |
2022-01-15 |
2023-08-13 |
mouse |
| Nina Gresner, Markus Rodehutscord, Karl-Heinz Südeku. Amino acid pattern of rumen microorganisms in cattle fed mixed diets-An update. Journal of animal physiology and animal nutrition. 2021-12-29. PMID:34964170. |
protozoa showed higher lys, asp, glu, ile and phe and lower ala, arg, gly, met, ser, thr and val proportions than bacteria (p < 0.05). |
2021-12-29 |
2023-08-13 |
cattle |
| Konstantin Röde. The effects of glycine to alanine mutations on the structure of GPO collagen model peptides. Physical chemistry chemical physics : PCCP. 2021-12-24. PMID:34951417. |
here, the computational energy landscape framework is employed to study gly to ala mutations in a gpo model peptide. |
2021-12-24 |
2023-08-13 |
Not clear |
| Emily Kim, Marie-Pierre Létourneau-Montminy, William Lambert, Tristan Chalvon-Demersay, Elijah G Kiari. Centennial Review: A meta-analysis of the significance of Eimeria infection on apparent ileal amino acid digestibility in broiler chickens. Poultry science. vol 101. issue 1. 2021-12-21. PMID:34930533. |
the type of challenge affected (p < 0.05) aid of aa with exception of cys, tyr, ala, ser, leu, asp, gly, and pro. |
2021-12-21 |
2023-08-13 |
Not clear |
| Tatsuhiko Goto, Kosei Ohya, Masahiro Takay. Genotype affects free amino acids of egg yolk and albumen in Japanese indigenous breeds and commercial Brown layer chickens. Poultry science. vol 101. issue 2. 2021-12-10. PMID:34890945. |
in 14 yolk (asn, ser, gln, gly, his, arg, ala, pro, tyr, val, met, leu, phe, and lys) and 8 albumen amino acid traits (gln, gly, his, arg, val, ile, leu, and lys), bor was significantly higher than ngy and ykd, while the opposite relations were seen in 2 amino acid traits (cys and gaba). |
2021-12-10 |
2023-08-13 |
chicken |
| Jinhye Ryu, Zhirong Fu, Srinivas Akula, Anna-Karin Olsson, Lars Hellma. Extended cleavage specificity of a Chinese alligator granzyme B homologue, a strict Glu-ase in contrast to the mammalian Asp-ases. Developmental and comparative immunology. vol 128. 2021-12-03. PMID:34826501. |
the alligator enzyme also showed strong preference for ala, pro and gly in the p2 position and val in the p3 position indicating that it has a narrow specificity, similar to the mammalian counterparts. |
2021-12-03 |
2023-08-13 |
xenopus_laevis |
| Yudai Shioji, Takuma Kobayashi, Takuya Yoshida, Tomoka Otagiri, Keita Onoda, Yasukiyo Yoshioka, Tatsuya Sasada, Noriyuki Miyosh. Nitrogen Balance and Bioavailability of Amino Acids in Spirulina Diet-Fed Wistar Rats. Journal of agricultural and food chemistry. vol 69. issue 46. 2021-11-25. PMID:34677963. |
additionally, amino acid profiling of portal/venous blood in spirulina diet-fed rats revealed that ala, gly, val, and leu/ile were markedly decreased after systemic circulation. |
2021-11-25 |
2023-08-13 |
rat |
| Kenji Nishimura, Daichi Ijiri, Saki Shimamoto, Masahiro Takaya, Akira Ohtsuka, Tatsuhiko Got. Genetic effect on free amino acid contents of egg yolk and albumen using five different chicken genotypes under floor rearing system. PloS one. vol 16. issue 10. 2021-11-24. PMID:34624067. |
one-way anova revealed significant effects of genotype on 10 egg traits, 8 yolk amino acids (asp, glu, ser, gly, thr, tyr, cys, and leu), and 11 albumen amino acids (asp, glu, asn, ser, gln, his, ala, tyr, trp, phe, and ile) contents. |
2021-11-24 |
2023-08-13 |
chicken |
| Felipe A C C Silva, Gabriela F da Silva, Bruna S Vieira, Adomar L Neto, Cecilia C Rocha, Edson G Lo Turco, Guilherme P Nogueira, Guilherme Pugliesi, Mario Binell. Peri-estrus ovarian, uterine, and hormonal variables determine the uterine luminal fluid metabolome in beef heifers. Biology of reproduction. vol 105. issue 5. 2021-11-18. PMID:34350935. |
concentrations of pro, ala, leu, gly, val, lys, ile, phe, asp, orn, tyr, arg, trp, suc, cit, adma, the sum of essential amino acids (aa), sum of nonessential aa, sum of aromatic aa, and total aa were greater in cluster a (fdr ≤ 0.05). |
2021-11-18 |
2023-08-13 |
cattle |
| Jinyu Chen, Yijun Yan, Leilei Zhang, Jiayu Zheng, Jinting Guo, Ruohan Li, Jiayu Zen. Purification of novel antioxidant peptides from myofibrillar protein hydrolysate of chicken breast and their antioxidant potential in chemical and H Food & function. vol 12. issue 11. 2021-11-17. PMID:34100502. |
structure-activity relationship indicated that the antioxidant capacity of the peptides was more related to the presence of hydrophobic and antioxidant amino acids (including trp, val, ile, leu, ala, pro, gly, asp, his, and tyr) in the sequences as well as their molecular structures. |
2021-11-17 |
2023-08-13 |
chicken |
| DaNae R Woodard, Emi Nakahara, John D Hullema. Clinically-identified C-terminal mutations in fibulin-3 are prone to misfolding and destabilization. Scientific reports. vol 11. issue 1. 2021-11-15. PMID:33542268. |
upon follow-up studies, when this conserved residue (l451) was mutated to a charged (asp or arg) or bulky (pro, trp, tyr) residue, f3 secretion was also compromised, indicating the importance of small side chains (leu, ala, or gly) at this residue. |
2021-11-15 |
2023-08-13 |
Not clear |
| Peixiao Wei, Wuyin Wen. Characteristics of pressurized hot water extract from abalone muscle and the antioxidant ability during simulated digestion in vitro. Journal of food science and technology. vol 57. issue 11. 2021-11-02. PMID:33071329. |
high proportions of glu and gly were found in the phe, ep40 and ep80, but the proportion of ala in ethanol soluble extract (ese) reached up to 46.00%. |
2021-11-02 |
2023-08-13 |
Not clear |
| Yukiko Imi, Katsumi Shibat. Nutritional Factors That Affect the Formation of 5-Aminolevulinic Acid, a Key Intermediate of Heme Biosynthesis. Journal of nutritional science and vitaminology. vol 67. issue 5. 2021-11-02. PMID:34719620. |
in mitochondria, ala is synthesized from succinyl-coa and glycine by the pyridoxal phosphate-dependent enzyme ala synthase [ec 2.3.1.37]. |
2021-11-02 |
2023-08-13 |
mouse |
| Sung-Tae Yang, Song-Yub Shin, Sung-Heui Shi. The Central PXXP Motif Is Crucial for PMAP-23 Translocation across the Lipid Bilayer. International journal of molecular sciences. vol 22. issue 18. 2021-11-01. PMID:34575916. |
here, we studied the potential roles of the pxxp motif in pmap-23 translocation across the lipid bilayer by replacing pro residues with either α-helix former ala (pmap-pa) or α-helix breaker gly (pmap-pg). |
2021-11-01 |
2023-08-13 |
Not clear |
| Wenjun Li, Bin Yang, Jiangyu Xu, Liling Peng, Shan Sun, Zhibo Huang, Xiuhua Jiang, Yongqi He, Zhoufei Wan. A genome-wide association study reveals that the 2-oxoglutarate/malate translocator mediates seed vigor in rice. The Plant journal : for cell and molecular biology. vol 108. issue 2. 2021-10-29. PMID:34376020. |
the levels of most amino acids, including the glu family (glu, pro, arg, and gaba), asp family (asp, thr, lys, ile, and met), ser family (ser, gly, and cys), and others (his, ala, leu, and val), were significantly reduced in the mature grains and the early germinating seeds of osomt mutants compared to wild type (wt). |
2021-10-29 |
2023-08-13 |
Not clear |
| Jianxun She. D-Amino acid substituted peptides as potential alternatives of homochiral L-configurations. Amino acids. vol 53. issue 2. 2021-10-26. PMID:33537892. |
ten prebiotic amino acids (gly, ala, asp, glu, ile, leu, pro, ser, thr, and val) were previously determined by multiple meteorite, spark discharge, and hydrothermal vent studies. |
2021-10-26 |
2023-08-13 |
Not clear |
| Ashley C Dougherty, Mariam G Hawaz, Kristine G Hoang, Judy Trac, Jacob M Keck, Carmen Ayes, Joseph E Dewees. Exploration of the Role of the C-Terminal Domain of Human DNA Topoisomerase IIα in Catalytic Activity. ACS omega. vol 6. issue 40. 2021-10-22. PMID:34660952. |
therefore, we generated a series of human top2a mutants where we changed specific ser and thr residues in the c-terminal domain to ala, gly, or ile residues. |
2021-10-22 |
2023-08-13 |
human |
| G M Jensen, D B Goodi. Impact of Proximal and Distal Pocket Site-Directed Mutations on the Ferric/Ferrous Heme Redox Potential of Yeast Cytochrome- Theoretical chemistry accounts. vol 130. issue 4-6. 2021-10-21. PMID:23505335. |
in most cases, ostensibly polar or charged residues are replaced by large hydrophobic groups or alternatively by ala or gly. |
2021-10-21 |
2023-08-12 |
Not clear |