| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Natalia Miekus, Chiara Luise, Wolfgang Sippl, Tomasz Baczek, Christian E H Schmelzer, Andrea Hein. MMP-14 degrades tropoelastin and elastin. Biochimie. vol 165. 2020-02-25. PMID:31278967. |
similar to cleavage preferences of matrix metalloproteinases-2, -7, -9 and -12, matrix metalloproteinase-14 prefers small and medium-sized hydrophobic residues including gly, ala, leu and val at cleavage site p1'. |
2020-02-25 |
2023-08-13 |
human |
| Natalia Miekus, Chiara Luise, Wolfgang Sippl, Tomasz Baczek, Christian E H Schmelzer, Andrea Hein. MMP-14 degrades tropoelastin and elastin. Biochimie. vol 165. 2020-02-25. PMID:31278967. |
pro, gly and ala were preferably found at p1-p4 and p2'-p4' in both tropoelastin and elastin. |
2020-02-25 |
2023-08-13 |
human |
| Ya-Lin Zhang, Xu-Dong Duan, Wei-Dan Jiang, Lin Feng, Pei Wu, Yang Liu, Jun Jiang, Sheng-Yao Kuang, Ling Tang, Wu-Neng Tang, Xiao-Qiu Zho. Soybean glycinin decreased growth performance, impaired intestinal health, and amino acid absorption capacity of juvenile grass carp (Ctenopharyngodon idella). Fish physiology and biochemistry. vol 45. issue 5. 2020-02-18. PMID:31256306. |
results were displayed as follows: (1) 8% dietary glycinin decreased growth performance, inhibited intestinal growth, and caused intestinal histology damage of grass carp; (2) dietary glycinin decreased the content of free neutral aas including val, ser, tyr, ala, pro, and gln in all intestinal segments, and thr, ile, leu, phe, and gly in the mi and di while downregulated the mrna levels of corresponding transporters including slc38a2, slc6a19b, and slc6a14 in all intestinal segments, and slc7a5, slc7a8, and slc1a5 in the mi and di. |
2020-02-18 |
2023-08-13 |
Not clear |
| M H Ghaffari, K Schuh, G Dusel, D Frieten, C Koch, C Prehn, J Adamski, H Sauerwein, H Sadr. Mammalian target of rapamycin signaling and ubiquitin-proteasome-related gene expression in skeletal muscle of dairy cows with high or normal body condition score around calving. Journal of dairy science. vol 102. issue 12. 2020-02-04. PMID:31587900. |
the serum concentrations of ala (d +21 and +84) and orn (d +84) were lower in hbcs cows than in nbcs cows, but those of gly, his, leu, val, lys, met, and orn on d -49 and ile on d +21 were greater in hbcs cows than in nbcs cows. |
2020-02-04 |
2023-08-13 |
Not clear |
| Loukas I Goulatis, Rasika Ramanathan, Eric V Shust. Impacts of the -1 Amino Acid on Yeast Production of Protein-Intein Fusions. Biotechnology progress. vol 35. issue 1. 2020-01-21. PMID:30341810. |
importantly, two amino acids, gly and ala, at the -1 position resulted in good cleavage efficiency with no undesirable autocleavage, and can be used in concert with refeeding strategies to increase total functionalizable protein yield for multiple protein fusion partners. |
2020-01-21 |
2023-08-13 |
Not clear |
| Kha The Nguyen, Jeong-Mok Kim, Sang-Eun Park, Cheol-Sang Hwan. N-terminal methionine excision of proteins creates tertiary destabilizing N-degrons of the Arg/N-end rule pathway. The Journal of biological chemistry. vol 294. issue 12. 2019-12-13. PMID:30674553. |
metaps have a well-known processing preference for nt-met with ala, ser, gly, thr, cys, pro, or val at position 2, but using chx-chase assays to assess protein degradation in yeast cells, as well as protein-binding and rt-qpcr assays, we demonstrate here that nme also occurs on nascent proteins bearing met-asn or met-gln at their n termini. |
2019-12-13 |
2023-08-13 |
human |
| Yu F Roslyakov, I M Pochitskaya, V V Litvyak, A N Kuryanovic. [Modeling of the Voprosy pitaniia. vol 86. issue 3. 2019-11-20. PMID:30645868. |
variations in the concentration of amino acids in the reaction medium with increasing temperature were characteristic for asp, gly, tyr, phe, ile, and with increasing the reaction time for asp, glu, his, gly, arg, ala, tyr, cys, phe, lys. |
2019-11-20 |
2023-08-13 |
chicken |
| Schubert, Smalla, Schmieder, Oschkina. MUSIC in triple-resonance experiments: amino acid type-selective (1)H-(15)N correlations Journal of magnetic resonance (San Diego, Calif. : 1997). vol 141. issue 1. 2019-11-20. PMID:10527741. |
experiments for gly (g-hsqc); ala (a-hsqc); thr, val, ile, and ala (tavi-hsqc); thr and ala (ta-hsqc), as well as asn and gln (n-hsqc and qn-hsqc), are described. |
2019-11-20 |
2023-08-12 |
Not clear |
| T Miyashita, R Takagi, M Okushima, S Nakano, H Miyamoto, E Nishikawa, A Matsushir. Complementary DNA Cloning and Characterization of Pearlin, a New Class of Matrix Protein in the Nacreous Layer of Oyster Pearls. Marine biotechnology (New York, N.Y.). vol 2. issue 5. 2019-11-20. PMID:11246407. |
from the sequencing data, pearlin was shown to be quite different from the fibrous protein rich in ala and gly. |
2019-11-20 |
2023-08-12 |
Not clear |
| Heinz-Bernhard Kraatz, Janusz Lusztyk, Gary D. Enrigh. Ferrocenoyl Amino Acids: A Synthetic and Structural Study. Inorganic chemistry. vol 36. issue 11. 2019-11-20. PMID:11669877. |
a series of ester-protected amino acids were coupled to ferrocenecarboxylic acid (1) using the dcc/hobt protocol to give ferrocenoyl n-amino acids (amino acid = glu(obz)(2) (2a), gly(oet) (2b), pro(obz) (2c), cys(sbz)ome (2d), ala(obz) (2e), tyr(obz) (2f), phe(obz) (2g)). |
2019-11-20 |
2023-08-12 |
Not clear |
| W. C. Hon, M. Griffith, P. Chong, DSC. Yan. Extraction and Isolation of Antifreeze Proteins from Winter Rye (Secale cereale L.) Leaves. Plant physiology. vol 104. issue 3. 2019-11-20. PMID:12232141. |
the amino acid compositions of these polypeptides were similar in that they were all relatively enriched in the residues asp/asn, glu/gln, ser, thr, gly, and ala; they all lacked his, except for the 26-kd polypeptide, and they contained up to 5% cys residues. |
2019-11-20 |
2023-08-12 |
Not clear |
| Kenji Ikehar. The Origin of tRNA Deduced from Pseudomonas aeruginosa 5' Anticodon-Stem Sequence : Anticodon-stem loop hypothesis. Origins of life and evolution of the biosphere : the journal of the International Society for the Study of the Origin of Life. vol 49. issue 1-2. 2019-11-18. PMID:31077036. |
these relationships imply that p. aeruginosa trna originated from four anticodon stem-loops (antic-sl) translating gnc codons to the corresponding four amino acids, gly, ala, asp and val (where n is g, c, a, or t). |
2019-11-18 |
2023-08-13 |
Not clear |
| Paulo Henrique Reis Furtado Campos, Elodie Merlot, David Renaudeau, Jean Noblet, Nathalie Le Floc'. Postprandial insulin and nutrient concentrations in lipopolysaccharide-challenged growing pigs reared in thermoneutral and high ambient temperatures1. Journal of animal science. vol 97. issue 8. 2019-11-18. PMID:31250878. |
at both ambient temperatures, pigs had lower (p < 0.05) postprandial concentrations of ala, gly, his, ile, leu, pro, ser, thr, trp, and val at p1 and p2 than at p0. |
2019-11-18 |
2023-08-13 |
Not clear |
| Hiroko Ikushiro, Atsushi Nagami, Tomoko Takai, Taiki Sawai, Yuki Shimeno, Hiroshi Hori, Ikuko Miyahara, Nobuo Kamiya, Takato Yan. Heme-dependent Inactivation of 5-Aminolevulinate Synthase from Caulobacter crescentus. Scientific reports. vol 8. issue 1. 2019-10-31. PMID:30242198. |
in many organisms, heme biosynthesis starts with the production of 5-aminolevulinic acid (ala) from glycine and succinyl-coenzyme a, a process catalyzed by a homodimeric enzyme, pyridoxal 5'-phosphate (plp)-dependent 5-aminolevulinate synthase (alas). |
2019-10-31 |
2023-08-13 |
Not clear |
| Yunpeng Zhao, Ying Feng, Jianqi Li, Yongzhao Guo, Liming Chen, Sitong Li. Insight into the Aggregation Capacity of Anammox Consortia during Reactor Start-Up. Environmental science & technology. vol 52. issue 6. 2019-09-17. PMID:29505708. |
specifically, the distinguishable up-regulation of the amino acids phe, leu, ala, thr, gly, glu, and val potentially contributed to the high biosynthesis of extracellular pn. |
2019-09-17 |
2023-08-13 |
Not clear |
| Woranud Pakdeedachakiat, Nantharat Phruksaphithak, Apichat Boontawa. Pretreatment of mulberry stem by cholinium-based amino acid ionic liquids for succinic acid fermentation and its application in poly(butylene) succinate production. Bioresource technology. vol 291. 2019-09-02. PMID:31377506. |
cholinium-glycinate ([ch][gly]) and cholinium-alanate ([ch][ala]) were investigated on the pretreatment of mulberry stem (ms). |
2019-09-02 |
2023-08-13 |
Not clear |
| Wen-Jing Li, Bei-Bei Xiang, Yan-Xiang Sun, Xiao-Qiang Hou, Mei-Ling Han, Xiao-Xue Li, Yong Wang, Shuo Gu. [Cloning and expression of SmDXS2 gene in Swertia mussotii]. Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica. vol 44. issue 5. 2019-08-14. PMID:30989852. |
they are belonging to 20 kinds of amino acids,and the most abundant amino acids include ala,gly and trp. |
2019-08-14 |
2023-08-13 |
Not clear |
| Shi Shen, Jingbo Wang, Xi Chen, Tingting Liu, Qin Zhuo, Shuang-Qing Zhan. Evaluation of cellular antioxidant components of honeys using UPLC-MS/MS and HPLC-FLD based on the quantitative composition-activity relationship. Food chemistry. vol 293. 2019-07-30. PMID:31151598. |
based on the quantitative composition-activity relationship, the cellular antioxidant activity (caa) assay of various honeys is closely related with the interaction of some phenolic compounds (isoferulic acid, 3,4-dihydroxy benzoic acid, 4-hydroxy benzoic acid, chlorogenic acid, caffeic acid, gallic acid, cryptochlorogenic acid, p-coumaric acid, salicylic acid), flavonoids (isosakuranetin, sakuranetin, pinocembrin, vitexin, taxifolin, galangin, luteolin, chrysin) and free amino acids (tyr, gly, ile, glu, val, phe, leu, asp, his, pro, ala). |
2019-07-30 |
2023-08-13 |
Not clear |
| Hong-Lian Li, Ying Ma, Chang-Jie Zheng, Wen-Yan Jin, Wen-Shan Liu, Run-Ling Wan. Exploring the effect of D61G mutation on SHP2 cause gain of function activity by a molecular dynamics study. Journal of biomolecular structure & dynamics. vol 36. issue 14. 2019-07-29. PMID:29125030. |
moreover, the residue interaction networks analysis, the hydrogen bond occupancy analysis and the binding free energies were calculated to gain detailed insight into the influence of the mutant d61g on the two regions, revealing that the major differences between shp2-wt and shp2-d61g were the different interactions between gly 61 and gly 462, gly 61 and ala 461, gln 506 and ile 463, gly 61 and asn 58, ile 463 and thr 466, gly 462 and cys 459. |
2019-07-29 |
2023-08-13 |
mouse |
| Teresa Garde-Cerdán, Gastón Gutiérrez-Gamboa, Javier Portu, José Ignacio Fernández-Fernández, Rocío Gil-Muño. Impact of phenylalanine and urea applications to Tempranillo and Monastrell vineyards on grape amino acid content during two consecutive vintages. Food research international (Ottawa, Ont.). vol 102. 2019-07-22. PMID:29195972. |
thus, variety was the determining factor in asp, glu, gln, cit, met, gly, gaba, val, ile, and leu while season was the factor that most affected thr, arg, ala, and lys due its implication on berry ripening. |
2019-07-22 |
2023-08-13 |
Not clear |