| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Beat Vögeli, Stefan Bibow, Celestine N Ch. Enzyme Selectivity Fine-Tuned through Dynamic Control of a Loop. Angewandte Chemie (International ed. in English). vol 55. issue 9. 2016-10-07. PMID:26822756. |
binding affinity is increased upon substitution of double gly to ala at the hinge regions of the loop. |
2016-10-07 |
2023-08-13 |
Not clear |
| Grant A Knoll, Steven M Romanelli, Alexandra M Brown, Rachel M Sortino, Ipsita A Banerje. Multilayered Short Peptide-Alginate Blends as New Materials for Potential Applications in Cartilage Tissue Regeneration. Journal of nanoscience and nanotechnology. vol 16. issue 3. 2016-10-05. PMID:27455656. |
this sequence mimics ala, gly, ser repeats seen in the spider silk protein. |
2016-10-05 |
2023-08-13 |
cattle |
| Yuebo Zhang, Longchao Zhang, Ligang Wang, Lijuan Qiao, Jing Liang, Hua Yan, Kebin Zhao, Xin Liu, Lixian Wan. Identification and examination of a novel 9-bp insert/deletion polymorphism on porcine SFTPA1 exon 2 associated with acute lung injury using an oleic acid-acute lung injury model. Animal science journal = Nihon chikusan Gakkaiho. vol 86. issue 6. 2016-09-26. PMID:25442010. |
through dna sequencing and the pcr-single-strand conformation polymorphism method, a novel 9-bp nucleotide insertion (+) or deletion (-) was detected on exon 2 of sftpa1, which causes a change in three amino acids, namely, alanine (ala), glycine (gly) and proline (pro). |
2016-09-26 |
2023-08-13 |
human |
| Shujing Wang, Ning Zhang, Tao Hu, Weiguo Dai, Xiuying Feng, Xinyi Zhang, Feng Qia. Viscosity-Lowering Effect of Amino Acids and Salts on Highly Concentrated Solutions of Two IgG1 Monoclonal Antibodies. Molecular pharmaceutics. vol 12. issue 12. 2016-09-14. PMID:26528726. |
these excipients include nine amino acids or their salt forms (ala, pro, val, gly, ser, hishcl, lyshcl, arghcl, and naglu), four representative salts (nacl, naac, na2so4, and nh4cl), and two chaotropic reagents (urea and gdnhcl). |
2016-09-14 |
2023-08-13 |
Not clear |
| Qifang Xu, Kimberly L Malecka, Lauren Fink, E Joseph Jordan, Erin Duffy, Samuel Kolander, Jeffrey R Peterson, Roland L Dunbrac. Identifying three-dimensional structures of autophosphorylation complexes in crystals of protein kinases. Science signaling. vol 8. issue 405. 2016-09-13. PMID:26628682. |
mutations in the complex interface may alter autophosphorylation activity and contribute to disease; therefore, we mutated residues in the autophosphorylation complex interface of lck and found that two mutations impaired autophosphorylation (t445v and n446a) and mutation of pro(447) to ala, gly, or leu increased autophosphorylation. |
2016-09-13 |
2023-08-13 |
Not clear |
| S Bovo, G Mazzoni, D G Calò, G Galimberti, F Fanelli, M Mezzullo, G Schiavo, E Scotti, A Manisi, A B Samoré, F Bertolini, P Trevisi, P Bosi, S Dall'Olio, U Pagotto, L Fontanes. Deconstructing the pig sex metabolome: Targeted metabolomics in heavy pigs revealed sexual dimorphisms in plasma biomarkers and metabolic pathways. Journal of animal science. vol 93. issue 12. 2016-08-23. PMID:26641177. |
the level of several aa (ala, arg, gly, his, lys, ser, thr, and trp) was higher in gilts (delta was from approximately 1.0 to approximately 4.8%) whereas products of aa catabolism (taurine, 2-aminoadipic acid, and methionine sulfoxide) were higher in castrated males (delta was approximately 5.0-6.0%), suggesting a metabolic shift in castrated males toward energy storage and lipid production. |
2016-08-23 |
2023-08-13 |
Not clear |
| Faris Karim, J Scott Smit. Formation of 4(5)-Methylimidazole in Aqueous d-Glucose-Amino Acids Model System. Journal of food science. vol 81. issue 1. 2016-08-17. PMID:26580486. |
an aqueous solution of glu was mixed individually in equimolar amounts at 3 concentrations (0.05, 0.1, and 0.15 m) with aqueous solutions of l-alanine (ala), l-arginine (arg), glycine (gly), l-lysine (lys), and l-serine (ser). |
2016-08-17 |
2023-08-13 |
human |
| Weixin Zhang, Yanli Cao, Jing Gong, Xiaoming Bao, Guanjun Chen, Weifeng Li. Identification of residues important for substrate uptake in a glucose transporter from the filamentous fungus Trichoderma reesei. Scientific reports. vol 5. 2016-08-03. PMID:26345619. |
in contrast with the charged residues, the substitution of phe 50 with either the hydrophilic residues asn and gln or the small residues gly and ala significantly enhanced the transport of glucose and its fluorescent analogue, 2-nbdg. |
2016-08-03 |
2023-08-13 |
Not clear |
| Baowei Yang, Chenyu Zhang, Xue Li, Sijia Yan, Wei Wei, Xuekun Wang, Xin Deng, Wenlong Huang, Hai Qia. Design, synthesis, and biological evaluation of novel peptide Gly(3) -MC62 analogues as potential antidiabetic agents. Chemical biology & drug design. vol 86. issue 5. 2016-08-01. PMID:25845421. |
two series of conformationally constrained analogues from gly(3) -mc62 were designed by scanning the residues lys(1) , thr(2) , met(4) , lys(5) , met(7,) and ala(8) with an i-(i + 2) lactam bridge consisting of a glutamic acid-xaa-lysine (glu-xaa-lys) scaffold and a diproline fragment. |
2016-08-01 |
2023-08-13 |
mouse |
| Keiji Ohno, Shohei Yamaguchi, Akira Nagasawa, Takashi Fujihar. Mechanochromism in the luminescence of novel cyclometalated platinum(II) complexes with α-aminocarboxylates. Dalton transactions (Cambridge, England : 2003). vol 45. issue 13. 2016-07-25. PMID:26905648. |
six novel phosphorescent cyclometalated platinum(ii) complexes with α-aminocarboxylato ligands, [pt(ii)(ppy)l] (ppy = 2-phenylpyridinato, l(-) = gly, ala, leu, ile, phe, sar), were synthesized, and the structures were determined by x-ray crystallography. |
2016-07-25 |
2023-08-13 |
Not clear |
| Keiji Ohno, Shohei Yamaguchi, Akira Nagasawa, Takashi Fujihar. Mechanochromism in the luminescence of novel cyclometalated platinum(II) complexes with α-aminocarboxylates. Dalton transactions (Cambridge, England : 2003). vol 45. issue 13. 2016-07-25. PMID:26905648. |
[pt(ii)(ppy)l] (l(-) = gly, ala) in crystals are in monomeric structures and stack through π-π interactions to form columns, and the features of the luminescence are similar to each other and those in solution, suggesting little influence of the π-π interactions on the luminescence. |
2016-07-25 |
2023-08-13 |
Not clear |
| M Kaneda, H Yonezawa, T Uchikob. Purification and Some Properties of a Protease from the Sarcocarp of Musk Melon Fruit. Bioscience, biotechnology, and biochemistry. vol 61. issue 12. 2016-07-12. PMID:27396886. |
from the digestion of ala-ala-pro-x-pna (x = phe, leu, val, ala, gly, lys, glu, pro, and diaminopropionic acid (dap) substrates the specificity of the protease was found to be approximately broad, but the preferential cleavage sites were c-terminal sites of hydrophobic or acidic amino acid residues at p, position. |
2016-07-12 |
2023-08-13 |
Not clear |
| Clemente Bretti, Ottavia Giuffrè, Gabriele Lando, Silvio Sammartan. Modeling solubility and acid-base properties of some amino acids in aqueous NaCl and (CH3)4NCl aqueous solutions at different ionic strengths and temperatures. SpringerPlus. vol 5. issue 1. 2016-07-07. PMID:27386372. |
new potentiometric experiments have been performed in nacl and in (ch3)4ncl media, to determine the protonation constants, the protonation enthalpy changes and the solubility of six natural α-amino acids, namely glycine (gly), alanine (ala), valine (val), leucine (leu), serine (ser) and phenylalanine (phe). |
2016-07-07 |
2023-08-13 |
Not clear |
| Seema Dalal, Michael Klemb. Amino acid efflux by asexual blood-stage Plasmodium falciparum and its utility in interrogating the kinetics of hemoglobin endocytosis and catabolism in vivo. Molecular and biochemical parasitology. vol 201. issue 2. 2016-06-07. PMID:26215764. |
here, we show that p. falciparum effluxes large quantities of certain non-polar (ala, leu, val, pro, phe, gly) and polar (ser, thr, his) amino acids to the external medium. |
2016-06-07 |
2023-08-13 |
human |
| S A Kaczmarek, A Barri, M Hejdysz, A Rutkowsk. Effect of different doses of coated butyric acid on growth performance and energy utilization in broilers. Poultry science. vol 95. issue 4. 2016-06-07. PMID:26740137. |
the apparent ileal digestibility of amino acid data showed that av or avb treated birds were characterized by higher asp, glu, cys, gly, and ala ileal digestibility than the control animals (p<0.05). |
2016-06-07 |
2023-08-13 |
Not clear |
| Toshiaki Takei, Kouhei Tsumoto, Masakuni Yoshino, Shuichi Kojima, Kazumori Yazaki, Takuya Ueda, Tsunetomo Takei, Fumio Arisaka, Kin-ichiro Miur. Role of positions e and g in the fibrous assembly formation of an amphipathic α-helix-forming polypeptide. Biopolymers. vol 102. issue 3. 2016-05-30. PMID:24615557. |
upon comparison of the amino acid sequences of α3 with other α-helix forming polypeptides, we proposed that the fibrous assemblies were formed due to the alanine (ala) residues at positions e and g. here, we characterized seven α3 analog polypeptides with serine (ser), glycine (gly), or charged residues substituted for ala at positions e and g. the α-helix forming abilities of the substituted polypeptides were less than that of α3. |
2016-05-30 |
2023-08-12 |
Not clear |
| Minou Bina, Phillip Wys. Impact of the MLL1 morphemes on codon utilization and preservation in CpG islands. Biopolymers. vol 103. issue 9. 2016-05-23. PMID:25991579. |
we uncovered preferential utilization of ggc for gly, gcg for ala, ccg for pro, and tcg for ser, in coding sequences (cdss) that included mll1 morphemes. |
2016-05-23 |
2023-08-13 |
human |
| Minou Bina, Phillip Wys. Impact of the MLL1 morphemes on codon utilization and preservation in CpG islands. Biopolymers. vol 103. issue 9. 2016-05-23. PMID:25991579. |
such repeats are generated from overlap of a morpheme (cgccg/cggcg), which depending on reading frame and orientation would produce runs of ala, gly, or pro in proteins. |
2016-05-23 |
2023-08-13 |
human |
| Azhagiya Singam Ettayapuram Ramaprasad, Sandeep Singh, Raghava Gajendra P S, Subramanian Venkatesa. AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides. PloS one. vol 10. issue 9. 2016-05-19. PMID:26335203. |
residues like cys, pro, ser, arg, trp, thr and gly are preferred while ala, asp, ile, leu, val and phe are not preferred in these peptides. |
2016-05-19 |
2023-08-13 |
Not clear |
| Soniya S Rao, Namitha Brijit Bejoy, Shridhar P Gejj. Hydrogen Bonding, (1)H NMR, and Molecular Electron Density Topographical Characteristics of Ionic Liquids Based on Amino Acid Cations and Their Ester Derivatives. The journal of physical chemistry. A. vol 119. issue 32. 2016-05-12. PMID:26192454. |
electronic structures of ion pairs consisting of amino acid cations ([aa(+)], aa = gly, ala, val, leu, ile, pro, ser, thr) and their ester substituted derivatives [aae(+)] interacting with nitrate anion [no3(-)] have been obtained from the dispersion corrected m06-2x density functional theory. |
2016-05-12 |
2023-08-13 |
Not clear |