| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| F Guay, N L Trottie. Muscle growth and plasma concentrations of amino acids, insulin-like growth factor-I, and insulin in growing pigs fed reduced-protein diets. Journal of animal science. vol 84. issue 11. 2006-12-18. PMID:17032795. |
the reduction in the dietary cp concentration increased postfeeding plasma concentrations of ala, lys, met (linear, p < 0.01), and gly (linear, p = 0.073) and decreased asn, ser, tyr, arg, his, and leu (linear, p < 0.05). |
2006-12-18 |
2023-08-12 |
Not clear |
| F Guay, N L Trottie. Muscle growth and plasma concentrations of amino acids, insulin-like growth factor-I, and insulin in growing pigs fed reduced-protein diets. Journal of animal science. vol 84. issue 11. 2006-12-18. PMID:17032795. |
in muscle tissue, concentrations of free ala, asp, glu, gln, gly, and lys increased (linear, p < 0.05) as the dietary cp concentration decreased. |
2006-12-18 |
2023-08-12 |
Not clear |
| Sumiko Mori, Maki Miyamoto, Satoshi Kaneko, Satoru Nirasawa, Shiro Komba, Takafumi Kasum. Characterization and kinetic analysis of enzyme-substrate recognition by three recombinant lactococcal PepVs. Archives of biochemistry and biophysics. vol 454. issue 2. 2006-12-12. PMID:16962986. |
in addition, l9 pepv has a much higher kcat for dipeptides with an n-terminal ala but a significantly higher km when the n-terminal amino acid is gly. |
2006-12-12 |
2023-08-12 |
Not clear |
| Pierre Tremouilhac, Erik Strandberg, Parvesh Wadhwani, Anne S Ulric. Synergistic transmembrane alignment of the antimicrobial heterodimer PGLa/magainin. The Journal of biological chemistry. vol 281. issue 43. 2006-12-07. PMID:16877761. |
this (2)h-nmr analysis is based on seven orientational constraints from ala-3,3,3-d(3) substituted in a non-perturbing manner for four native ala residues as well as two ile and one gly. |
2006-12-07 |
2023-08-12 |
xenopus_laevis |
| Kathryn D Kloepper, Wendy S Woods, Kem A Winter, Julia M George, Chad M Rienstr. Preparation of alpha-synuclein fibrils for solid-state NMR: expression, purification, and incubation of wild-type and mutant forms. Protein expression and purification. vol 48. issue 1. 2006-12-05. PMID:16564705. |
the number of signals and intensities of well-resolved residue types (thr, ser, ala, gly, val, and ile) are consistent with a single conformation, which is reproducibly prepared by seeding consecutive preparations. |
2006-12-05 |
2023-08-12 |
Not clear |
| Samuel A Mantey, Nieves Gonzalez, Michael Schumann, Tapas K Pradhan, Lin Shen, David H Coy, Robert T Jense. Identification of bombesin receptor subtype-specific ligands: effect of N-methyl scanning, truncation, substitution, and evaluation of putative reported selective ligands. The Journal of pharmacology and experimental therapeutics. vol 319. issue 2. 2006-12-04. PMID:16943256. |
of the four shortened analogs of [d-phe(6),betaala(11),phe(13),nle(14)]bn(6-14) reported to be potent selective brs-3 ligands on [ca(2+)](i) assays, only acphe,trp,ala,his(taubzl),nip,gly,arg-nh(2) had moderate selectivity for hbrs-3; however, it was less selective than previously reported apa(11) analogs, demonstrating these are still the most selective brs-3 analogs available. |
2006-12-04 |
2023-08-12 |
human |
| Richard Graeff, Qun Liu, Irina A Kriksunov, Quan Hao, Hon Cheung Le. Acidic residues at the active sites of CD38 and ADP-ribosyl cyclase determine nicotinic acid adenine dinucleotide phosphate (NAADP) synthesis and hydrolysis activities. The Journal of biological chemistry. vol 281. issue 39. 2006-11-27. PMID:16861223. |
changing glu(146) to uncharged gly and ala, and asp(155) to gln and asn, by site-directed mutagenesis indeed eliminated the strong ph dependence. |
2006-11-27 |
2023-08-12 |
Not clear |
| Kazuki Nakashima, Aiko Ishida, Yoko Yakabe, Makoto Yamazaki, Hiroyuki Ab. Effects of orally administrated amino acids on myofibrillar proteolysis in chicks. Bioscience, biotechnology, and biochemistry. vol 70. issue 8. 2006-11-14. PMID:16926512. |
plasma n(tau)-methylhistidine concentration, as an index of myofibrillar proteolysis, was decreased by the administration of glu, gly, ala, leu, ile, ser, thr, met, trp, asn, gln, pro, lys and arg but not by asp, val, phe, tyr or his to chicks. |
2006-11-14 |
2023-08-12 |
Not clear |
| Kazuki Nakashima, Aiko Ishida, Yoko Yakabe, Makoto Yamazaki, Hiroyuki Ab. Effects of orally administrated amino acids on myofibrillar proteolysis in chicks. Bioscience, biotechnology, and biochemistry. vol 70. issue 8. 2006-11-14. PMID:16926512. |
these results indicate that oral glu, gly, ala, leu, ile, ser, thr, met, trp, asn, gln, pro, lys and arg administration suppressed myofibrillar proteolysis in chicks. |
2006-11-14 |
2023-08-12 |
Not clear |
| M A Qasim, Robert L Van Etten, Tina Yeh, C Saunders, P J Ganz, S Qasim, L Wang, M Laskowsk. Despite having a common P1 Leu, eglin C inhibits alpha-lytic proteinase a million-fold more strongly than does turkey ovomucoid third domain. Biochemistry. vol 45. issue 38. 2006-11-08. PMID:16981694. |
the million-fold stronger inhibition by eglin c is retained when the ka values of the p1 gly, ala, ser, and ile variants of omtky3 and eglin c are compared. |
2006-11-08 |
2023-08-12 |
Not clear |
| Hans J Maree, Eric van der Walt, Friedrich A C Tiedt, Terry N Hanzlik, Maryke Appe. Surface display of an internal His-tag on virus-like particles of Nudaurelia capensis omega virus (NomegaV) produced in a baculovirus expression system. Journal of virological methods. vol 136. issue 1-2. 2006-10-31. PMID:16797733. |
as a first step towards manipulating the tropism of tetraviral nanoparticles (capsivectors), a (his)6-tag was inserted into the gh loop (between ala 378 and gly 379) of the surface-exposed ig-like domain of nomegav capsid protein (p70). |
2006-10-31 |
2023-08-12 |
Not clear |
| Christina Marchetti Bradley, Doug Barric. The notch ankyrin domain folds via a discrete, centralized pathway. Structure (London, England : 1993). vol 14. issue 8. 2006-10-24. PMID:16905104. |
to determine if folding proceeds along parallel pathways and the order in which repeats become structured during folding, we examined the effect of analogous destabilizing ala-->gly substitutions in each repeat on folding kinetics. |
2006-10-24 |
2023-08-12 |
Not clear |
| J S Radcliffe, R S Pleasant, E T Kornega. Estimating equivalency values of microbial phytase for amino acids in growing and finishing pigs fitted with steered ileo-cecal valve cannulas. Journal of animal science. vol 84. issue 5. 2006-10-19. PMID:16612014. |
supplementing diets with phytase increased the aid of ca (p < 0.01), p (p < 0.001), cp (p = 0.07), and the aa (p < 0.10) gly, ala, val, ile, thr, tsaa, asp, glu, phe, lys, and arg. |
2006-10-19 |
2023-08-12 |
Not clear |
| J López-Llano, L A Campos, J Sanch. Alpha-helix stabilization by alanine relative to glycine: roles of polar and apolar solvent exposures and of backbone entropy. Proteins. vol 64. issue 3. 2006-10-04. PMID:16755589. |
herein, the contribution of these two effects and that of hydrophilic area burial is evaluated by analyzing ala and gly mutants implemented in three helices of apoflavodoxin. |
2006-10-04 |
2023-08-12 |
Not clear |
| J López-Llano, L A Campos, J Sanch. Alpha-helix stabilization by alanine relative to glycine: roles of polar and apolar solvent exposures and of backbone entropy. Proteins. vol 64. issue 3. 2006-10-04. PMID:16755589. |
these data, combined with available data for similar mutations in other proteins (22 ala/gly mutations in alpha-helices have been considered), allow estimation of the difference in backbone entropy between alanine and glycine and evaluation of its contribution and that of apolar and polar area burial to the helical stabilization typically associated to gly-->ala substitutions. |
2006-10-04 |
2023-08-12 |
Not clear |
| J López-Llano, L A Campos, J Sanch. Alpha-helix stabilization by alanine relative to glycine: roles of polar and apolar solvent exposures and of backbone entropy. Proteins. vol 64. issue 3. 2006-10-04. PMID:16755589. |
in this respect, the excised-peptide model of the unfolded state, proposed by creamer and coworkers (1995), predicts a major contribution of polar area burial, which is in good agreement with recent quantitations of the relative enthalpic contribution of ala and gly residues to alpha-helix formation. |
2006-10-04 |
2023-08-12 |
Not clear |
| Dian-Fan Li, Jing Li, Li Ma, Lei Zhang, Ying-Tang L. Calmodulin isoform-specific activation of a rice calmodulin-binding kinase conferred by only three amino-acids of OsCaM61. FEBS letters. vol 580. issue 18. 2006-09-19. PMID:16842786. |
in addition, ala(111), gly(123) and ser(127) were identified as critical residues for oscbk activation. |
2006-09-19 |
2023-08-12 |
Not clear |
| Kristian R Poulsen, Thomas K Sørensen, Laurent Duroux, Evamaria I Petersen, Steffen B Petersen, Reinhard Wimme. The interaction of Fusarium solani pisi cutinase with long chain spin label esters. Biochemistry. vol 45. issue 30. 2006-09-05. PMID:16866362. |
relaxation changes in the amino acid pairs ser 92, ala 93 and thr 173, gly 174 positioned at the edge of each of the active site flanking loops make these residues prime candidates for hinges, allowing for structural rearrangement during substrate binding. |
2006-09-05 |
2023-08-12 |
Not clear |
| Rachel M Johnson, Arianna Rath, Roman A Melnyk, Charles M Debe. Lipid solvation effects contribute to the affinity of Gly-xxx-Gly motif-mediated helix-helix interactions. Biochemistry. vol 45. issue 28. 2006-08-31. PMID:16834324. |
here, we used the in vivo toxcat assay to measure the relative affinities of all 18 combinations of gly, ala, and ser "small-xxx-small" mutations in glycophorin a (gpa) and bacteriophage m13 major coat protein (mcp) homodimers. |
2006-08-31 |
2023-08-12 |
Not clear |
| A Deglaire, P J Moughan, C Bos, D Tom. Commercial Phaseolus vulgaris extract (starch stopper) increases ileal endogenous amino acid and crude protein losses in the growing rat. Journal of agricultural and food chemistry. vol 54. issue 14. 2006-08-21. PMID:16819935. |
ileal endogenous amino acid (aa) losses were significantly higher (p < 0.05) in pf3 (20% higher than in pf1), except for pro, gly, ala, and his. |
2006-08-21 |
2023-08-12 |
rat |