| Publication |
Sentence |
Publish Date |
Extraction Date |
Species |
| Yalin Wu, Denong Wan. A new class of natural glycopeptides with sugar moiety-dependent antioxidant activities derived from Ganoderma lucidum fruiting bodies. Journal of proteome research. vol 8. issue 2. 2009-04-06. PMID:18989955. |
comparable radical-scavenging activities observed between ptc and pgy demonstrated that the removal of ala and gly in a peptide moiety did not result in the variation of biological functions of pgy. |
2009-04-06 |
2023-08-12 |
Not clear |
| Kazushi Kanazawa, Yuki Sato, Kazuhiro Ohki, Keiko Okimura, Yoshiki Uchida, Mitsuno Shindo, Naoki Sakur. Contribution of each amino acid residue in polymyxin B(3) to antimicrobial and lipopolysaccharide binding activity. Chemical & pharmaceutical bulletin. vol 57. issue 3. 2009-04-03. PMID:19252313. |
[d-ala(6)]-, [l-phe(6)]-, [ala(7)]-, and [gly(7)]-polymyxin b(3) analogs retained potent antimicrobial activity, indicating that neither the reduction of hydrophobic character of the d-phe(6)-leu(7) region nor the d-configuration at position 6 is indispensable for antimicrobial activity. |
2009-04-03 |
2023-08-12 |
Not clear |
| J W Waggoner, C A Löest, C P Mathis, D M Hallford, M K Peterse. Effects of rumen-protected methionine supplementation and bacterial lipopolysaccharide infusion on nitrogen metabolism and hormonal responses of growing beef steers. Journal of animal science. vol 87. issue 2. 2009-04-01. PMID:18849391. |
plasma concentrations of thr, lys, leu, ile, phe, trp, asn, glu, and orn decreased, plasma ala increased, and gly and ser initially increased, then declined in +lps vs. -lps steers (lps x h; p < or = 0.04). |
2009-04-01 |
2023-08-12 |
Not clear |
| Yanqiang Zhang, Suojiang Zhang, Xingmei Lu, Qing Zhou, Wei Fan, XiangPing Zhan. Dual amino-functionalised phosphonium ionic liquids for CO2 capture. Chemistry (Weinheim an der Bergstrasse, Germany). vol 15. issue 12. 2009-04-01. PMID:19185037. |
a series of 20 dual amino-functionalised phosphonium ionic liquids, (3-aminopropyl)tributylphosphonium amino acid salts ([ap(4443)][aa], in which [aa](-) = [ala](-), [arg](-), [asn](-), [asp](-), [cys](-), [gln](-), [glu](-), [gly](-), [his](-), [ile](-), [leu](-), [lys](-), [met](-), [phe](-), [pro](-), [ser](-), [thr](-), [trp](-), [tyr](-) and [val](-)), has been prepared. |
2009-04-01 |
2023-08-12 |
Not clear |
| Yanqiang Zhang, Suojiang Zhang, Xingmei Lu, Qing Zhou, Wei Fan, XiangPing Zhan. Dual amino-functionalised phosphonium ionic liquids for CO2 capture. Chemistry (Weinheim an der Bergstrasse, Germany). vol 15. issue 12. 2009-04-01. PMID:19185037. |
furthermore, the co(2) absorption of [ap(4443)][gly], [ap(4443)][ala], [ap(4443)][val] and [ap(4443)][leu], taken as examples, was investigated. |
2009-04-01 |
2023-08-12 |
Not clear |
| Nicole G H Leferink, Marco W Fraaije, Henk-Jan Joosten, Peter J Schaap, Andrea Mattevi, Willem J H van Berke. Identification of a gatekeeper residue that prevents dehydrogenases from acting as oxidases. The Journal of biological chemistry. vol 284. issue 7. 2009-03-31. PMID:19088070. |
here we show that a single ala to gly substitution in l-galactono-gamma-lactone dehydrogenase (galdh) turns the enzyme into a catalytically competent oxidase. |
2009-03-31 |
2023-08-12 |
Not clear |
| Yoshinobu Shiose, Hiroshi Kuga, Hitoshi Ohki, Masahiro Ikeda, Fumiyoshi Yamashita, Mitsuru Hashid. Systematic research of peptide spacers controlling drug release from macromolecular prodrug system, carboxymethyldextran polyalcohol-peptide-drug conjugates. Bioconjugate chemistry. vol 20. issue 1. 2009-03-23. PMID:19090781. |
225 conjugates of carboxymethyldextran polyalcohol (cm-dex-pa) as water-soluble carrier and a dansyl derivative (n-(4-aminobutyl)-5-(dimethylamino)-1-naphthalenesulfonamide, dns) as the model drug linked with different tetrapeptide spacers (gly-gly-p(2)-p(1), p(2), p(1): ala, asn, gly, cit, gln, ile, leu, met, phe, pro, ser, thr, trp, tyr, and val) were combinatorially synthesized. |
2009-03-23 |
2023-08-12 |
mouse |
| William E Boeglin, Aya Itoh, Yuxiang Zheng, Gianguido Coffa, Gregg A Howe, Alan R Bras. Investigation of substrate binding and product stereochemistry issues in two linoleate 9-lipoxygenases. Lipids. vol 43. issue 11. 2009-03-18. PMID:18795358. |
site-directed mutagenesis of a conserved active site ala (ala562 in atlox1, ala 564 in tomato loxa, and typically conserved as ala in s-lox and gly in r-lox), revealed that substitution with gly led to the production of a mixture of 9s- and 13r-hydroperoxyoctadecadienoic acids from linoleic acid. |
2009-03-18 |
2023-08-12 |
Not clear |
| Thomas Nauser, Giulio Casi, Willem H Koppenol, Christian Schöneic. Reversible intramolecular hydrogen transfer between cysteine thiyl radicals and glycine and alanine in model peptides: absolute rate constants derived from pulse radiolysis and laser flash photolysis. The journal of physical chemistry. B. vol 112. issue 47. 2009-03-06. PMID:18973367. |
the order of reactivity, gly > ala, is in accord with previous studies on intermolecular reactions of thiyl radicals with these amino acids. |
2009-03-06 |
2023-08-12 |
Not clear |
| M A Neelakantan, F Rusalraj, J Dharmaraja, S Johnsonraja, T Jeyakumar, M Sankaranarayana Pilla. Spectral characterization, cyclic voltammetry, morphology, biological activities and DNA cleaving studies of amino acid Schiff base metal(II) complexes. Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy. vol 71. issue 4. 2009-03-05. PMID:18656419. |
metal complexes are synthesized with schiff bases derived from o-phthalaldehyde (opa) and amino acids viz., glycine (gly) l-alanine (ala), l-phenylalanine (pal). |
2009-03-05 |
2023-08-12 |
Not clear |
| Guangshun Wang, Xia Li, Zhe Wan. APD2: the updated antimicrobial peptide database and its application in peptide design. Nucleic acids research. vol 37. issue Database issue. 2009-03-03. PMID:18957441. |
statistical analyses reveal that the frequently used amino acid residues (>10%) are ala and gly in bacterial peptides, cys and gly in plant peptides, ala, gly and lys in insect peptides, and leu, ala, gly and lys in amphibian peptides. |
2009-03-03 |
2023-08-12 |
human |
| N Cecilia Martinez-Gomez, Russell R Poyner, Steven O Mansoorabadi, George H Reed, Diana M Down. Reaction of AdoMet with ThiC generates a backbone free radical. Biochemistry. vol 48. issue 2. 2009-02-12. PMID:19113839. |
the epr properties of the radical are consistent with any residue other than a gly or ala. |
2009-02-12 |
2023-08-12 |
Not clear |
| Tzonyo Dimitrov, Ali A Dashti, Ossama Albaksami, Edet E Udo, Mehrez M Jadaon, M John Alber. Ciprofloxacin-resistant Salmonella enterica serovar typhi from Kuwait with novel mutations in gyrA and parC genes. Journal of clinical microbiology. vol 47. issue 1. 2009-02-02. PMID:18971360. |
both isolates had three novel gyra mutations (55-leu-->trp, 87-asp-->ala, and 106-gln-->arg) and three novel parc mutations (84-glu-->lys, 106-trp-->gly, and 128-tyr-->asp). |
2009-02-02 |
2023-08-12 |
Not clear |
| Ronghu Wu, Terry B McMaho. An investigation of protonation sites and conformations of protonated amino acids by IRMPD spectroscopy. Chemphyschem : a European journal of chemical physics and physical chemistry. vol 9. issue 18. 2009-01-22. PMID:18846594. |
the protonation sites and structures of a series of protonated amino acids (gly, ala, pro, phe, lys and ser) are investigated by means of infrared multiple-photon dissociation (irmpd) spectroscopy and electronic-structure calculations. |
2009-01-22 |
2023-08-12 |
Not clear |
| Ronghu Wu, Terry B McMaho. An investigation of protonation sites and conformations of protonated amino acids by IRMPD spectroscopy. Chemphyschem : a European journal of chemical physics and physical chemistry. vol 9. issue 18. 2009-01-22. PMID:18846594. |
for gly, ala, and pro, in each of the most stable isomers the protonated amino group forms an intramolecular hydrogen bond with the adjacent carbonyl oxygen. |
2009-01-22 |
2023-08-12 |
Not clear |
| Matthew R Stump, Lisa M Glos. Mutational analysis of the stability of the H2A and H2B histone monomers. Journal of molecular biology. vol 384. issue 5. 2009-01-07. PMID:18976667. |
a series of ala and gly mutations were introduced into h2a and h2b to probe the importance of helix propensity on the structure and stability of the monomers. |
2009-01-07 |
2023-08-12 |
Not clear |
| Sing Fee Lim, May May Lee, Peiqing Zhang, Zhiwei Son. The Golgi CMP-sialic acid transporter: A new CHO mutant provides functional insights. Glycobiology. vol 18. issue 11. 2008-12-31. PMID:18713811. |
the cmp-sat only lost partial activity if the same gly residues were substituted with ala, suggesting that the lack of side chain in gly residues in the transmembrane domains is essential for transport activity. |
2008-12-31 |
2023-08-12 |
Not clear |
| Yeeting E Chong, Xiang-Lei Yang, Paul Schimme. Natural homolog of tRNA synthetase editing domain rescues conditional lethality caused by mistranslation. The Journal of biological chemistry. vol 283. issue 44. 2008-12-29. PMID:18723508. |
editing repairs the confusion of serine and glycine for alanine through clearance of mischarged (with ser or gly) trna(ala). |
2008-12-29 |
2023-08-12 |
mouse |
| Jean-Philippe Godin, Denis Breuillé, Christiane Obled, Isabelle Papet, Henk Schierbeek, Gérard Hopfgartner, Laurent-Bernard Fa. Liquid and gas chromatography coupled to isotope ratio mass spectrometry for the determination of 13C-valine isotopic ratios in complex biological samples. Journal of mass spectrometry : JMS. vol 43. issue 10. 2008-12-16. PMID:18383273. |
indeed, lc-irms can be used, as shown by the new method reported here, to obtain a baseline separation and to measure (13)c isotopic enrichment of underivatised amino acids (asp, thr-ser, glu, pro, gly, ala, cys and val). |
2008-12-16 |
2023-08-12 |
rat |
| Anthony J O'Donoghue, Cathal S Mahon, David H Goetz, James M O'Malley, Denise M Gallagher, Min Zhou, Patrick G Murray, Charles S Craik, Maria G Tuoh. Inhibition of a secreted glutamic peptidase prevents growth of the fungus Talaromyces emersonii. The Journal of biological chemistry. vol 283. issue 43. 2008-12-11. PMID:18687686. |
substrate profiling of 16 peptides determined that tgp1 has broad specificity with a preference for large residues in the p1 site, particularly met, gln, phe, lys, glu, and small amino acids at p1' such as ala, gly, ser, or thr. |
2008-12-11 |
2023-08-12 |
cat |